Because of its simple body plan and ease of gene knockout and allele replac
ement, the moss Physcomitrella patens is often used as a model system for s
tudies in plant physiology and developmental biology. Gene-trap and enhance
r-trap systems are useful techniques for cloning genes and enhancers that f
unction in specific tissues or cells. Additionally, these systems are conve
nient for obtaining molecular markers specific for certain developmental pr
ocesses. Elements for gene-trap and enhancer-trap systems were constructed
using the uidA reporter gene with either a splice acceptor or a minimal pro
moter. Through a high rate of transformation conferred by a method utilizin
g homologous recombination, 235 gene-trap and 1073 enhancer-trap lines were
obtained from 5637 and 3726 transgenic lines, respectively. The expression
patterns of these trap lines in the moss gametophyte varied. The candidate
gene trapped in a gene-trap line YH209, which shows rhizoid-specific expre
ssion, was obtained by 5' and 3' RACE. This gene was named PpGLU, and forms
a clade with plant acidic alpha -glucosidase genes. Thus, these gene-trap
and enhancer-trap systems should prove useful to identify tissue- and cell-
specific genes in Physcomitrella.